Comparing and Contrasting Delirium and Acute Encephalopathy

Comparing and Contrasting Delirium and Acute Encephalopathy

Last week I wrote about querying for the type of acute encephalopathy, and I’d like to continue this week. Please know, when I use the term “acute encephalopathy” in this article, it can include either metabolic or toxic encephalopathy, which are the most specific types of acute encephalopathy available within the applicable code set.

Additionally, I am not endorsing a definition of acute encephalopathy; instead, my goal is to offer direction on how to approach appeals if acute encephalopathy is challenged as a clinically valid diagnosis.

A lack of a standard definition for acute encephalopathy and variability in how it presents makes it extremely vulnerable to clinical validation denials. Dorland’s Medical Dictionary includes the following definitions:

  • Encephalopathy is any degenerative disease of the brain.
  • Hypoxic encephalopathy is “caused by hypoxia from either decreased rate of blood flow or decreased oxygen content of arterial blood; symptoms in mild cases include intellectual, visual, and motor disturbances.“
  • Metabolic encephalopathy is a “neuropsychiatric disturbances due to metabolic brain disease; it may be primary resulting from conditions such as hypoxia or ischemia that affect the brain directly or it may be secondary to diseases of other organs.” 
  • Septic-associated encephalopathy is “altered brain function owing to the presence of infectious agents in the blood, along with effects of accompanying fever; symptoms vary from mild to severe and may include confusion, myopathy with rigidity, and more serious conditions such as seizures and coma.”

Notably, Dorland does not have a definition for toxic encephalopathy.

The American Hospital Association (AHA) Coding Handbook defines encephalopathy as “a general term used to describe any disorder of cerebral function.” It also notes there are “more than 150 different terms” associated with encephalopathy in the medical literature, many of which cannot be captured within the ICD-10-CM code set. It includes definitions for metabolic and toxic encephalopathy as follows:

  • Metabolic encephalopathy is “damage to the brain due to lack of glucose, oxygen, or other metabolic agents, or caused by organ dysfunction. Symptoms include an altered state of consciousness, usually characterized as delirium, confusion, or agitation, and changes in behavior or personality.”
  • Toxic encephalopathy is “caused by exposure to toxic substances or as an adverse effect of medication. It is characterized by an altered mental status, and symptoms can include memory loss, small personality changes, lack of concentration, involuntary movements, nausea, fatigue, seizures, arm strength problems, and depression.”

With definitions that are mostly dependent on subjective data, what are we to do, as clinical documentation integrity (CDI) professionals? To me, the most important feature of acute encephalopathy is acute change in mental status, with a return to baseline by discharge. This standard can be used in a patient with or without dementia, which is a discussion for another time.

Another key concept is “transient,” which is often used when defining encephalopathy, because it is usually reversible. Using an artificial intelligence (AI) tool, I could not find any reference that symptoms must persist for a particular amount of time to clinically validate a diagnosis of acute encephalopathy. Sometimes, like in the case of low glucose or low oxygen, recovery can occur quickly. In contrast, when acute encephalopathy is related to an infection or toxin, it may take longer for the body to recover and mental status to return to baseline. A quick return to baseline, following treatment of the underlying condition, does not exclude a diagnosis of acute encephalopathy if it meets criteria for reporting.

Why do we query for acute encephalopathy? Documentation of altered mental status (AMS) requires clarification because it maps to R41.82, a symptom code. All too often, patients present to the emergency department for AMS. The problem is determining the appropriate associated diagnosis or diagnoses that represent the clinical scenario (and should, thereby, be offered as query response choices).

Most queries for clarification of AMS include the choices of metabolic encephalopathy, toxic encephalopathy, or delirium. I purposely did not include “encephalopathy” because it is a less specific diagnosis, as noted in my last article. It is also unlikely that both metabolic and toxic encephalopathy need to be offered as choices, unless the patient is experiencing kidney or liver failure, in which case either could be appropriate, depending on the provider’s perspective. Remember that the Guidelines for Achieving a Compliant Query Practice (2022 Update) state:

“Multiple choice query formats should include clinically significant and reasonable option(s) as supported by clinical indicator(s) in the health record, recognizing that occasionally there may be only one reasonable option. . . There is no mandatory or minimum number of choices necessary to constitute a compliant multiple-choice query (p. 9).

Should delirium always be included as an option when querying for acute encephalopathy? Both acute encephalopathy and delirium can have similar presentations.

Dorland’s Medical Dictionary defines delirium as “an acute, transient disturbance of consciousness accompanied by a change in cognition and having a fluctuating course.” It is characterized by a reduced ability to maintain attention to external stimuli and disorganized thinking, as manifested by rambling, irrelevant, or incoherent speech; there may also be a reduced level of consciousness, sensory misperceptions, disturbance of the sleep-wake cycle and level of psychomotor activity, disorientation to time, place, or person; and memory impairment.

Like acute encephalopathy, delirium can be caused by conditions that result in derangement of cerebral metabolism, including systemic infection, poisoning, drug intoxication or withdrawal, seizures or head trauma, and metabolic disturbances.

The primary difference between acute encephalopathy and delirium is that symptoms associated with delirium fluctuate. The DSM-5-TR (Diagnostic and Statistical Manual of Mental Disorders, Fifth Edition, Text Revision) notes that the course of delirium often fluctuates and is more pronounced later in the day and at night, when there are fewer external orienting stimuli. In contrast, encephalopathic patients typically do not exhibit this fluctuation.

Additionally, acute encephalopathy is unlikely to be responsive to antipsychotic medications that are often used to treat delirium.

What can be problematic is that delirium is often an indicator of acute encephalopathy. Even worse, many providers use the terms delirium and acute encephalopathy interchangeably. A recent article on ICU Delirium (Mohammed, A. and Cascella, M. (March 2024), equates delirium with “acute confusional state, “toxic or metabolic encephalopathy,” or “acute brain failure.” Another important feature of delirium, which is also true for acute encephalopathy, is that these are diagnoses of exclusion.

Although delirium and acute encephalopathy may be clinically similar, they are not equal in terms of the code set – and therefore, do not equally represent the clinical scenario or patient acuity. Delirium without further specificity maps to R41.0, disorientation, unspecified, with an inclusion term of confusion. Why replace one symptom code, R41.82 altered mental status, with another one if there is evidence of a definitive diagnosis?

Additionally, the terms acute and subacute are nonessential modifiers, meaning the code set does not have a different code for “acute delirium;” it will also be reported as R41.0, disorientation, unspecified.

To report a diagnosis code, delirium must be associated with alcohol or other substances or a known psychological condition. Unlike metabolic encephalopathy, as discussed last week, use of F05, delirium due to known physiological condition includes a code-first note, because it is part of an etiology/manifestation pair, so the etiology must be reported. Additionally, F codes are assigned to mental, behavioral, and neurodevelopmental disorders.

Some may be hesitant to query if delirium is documented because they don’t want to lead the provider, since a response of acute metabolic or toxic encephalopathy will add a major complication/comorbidity (MCC) to the claim. If there are clinical indicators that support acute encephalopathy as a reportable diagnosis, it is not leading to query for additional clarification. It is also possible for a patient to have both delirium or delirium due to a known psychological condition and acute encephalopathy. There are no Excludes 1 notes (don’t code together) associated with codes that represent either of these conditions. Next week, I’ll continue my series on acute encephalopathy by discussing why it’s not necessary and it could be problematic to include coma scores as clinical indicators of acute encephalopathy.

Facebook
Twitter
LinkedIn

Cheryl Ericson, RN, MS, CCDS, CDIP

Cheryl is the Senior Director of Clinical Policy and Education, Brundage Group. She is an experienced revenue cycle expert and is known internationally for her work as a CDI professional. Cheryl has helped establish industry guidance through contributions to ACDIS white papers and several AHIMA Practice Briefs in the areas of CDI, Denials, Quality, Querying and HIM Technology.

Related Stories

Leave a Reply

Please log in to your account to comment on this article.

Featured Webcasts

2026 ICD-10-CM/PCS Coding Clinic Update Webcast Series

Uncover essential coding insights with nationally recognized coding authority Kay Piper, RHIA, CDIP, CCS. Through ICD10monitor’s interactive, on‑demand webcast series, Kay walks you through the AHA’s 2026 ICD‑10‑CM/PCS Quarterly Coding Clinics, translating each update into practical, easy‑to‑apply guidance designed to sharpen precision, ensure compliance, and strengthen day‑to‑day decision‑making. Available shortly after each official release.

April 13, 2026

2026 ICD-10-CM/PCS Coding Clinic Update: Fourth Quarter

Uncover critical guidance on the ICD-10-CM/PCS code updates. Kay Piper reviews and explains ICD-10-CM/PCS coding guidelines in the AHA’s fourth quarter 2026 ICD-10-CM/PCS Coding Clinic in an easy to access on-demand webcast.

December 14, 2026

2026 ICD-10-CM/PCS Coding Clinic Update: Third Quarter

Uncover critical guidance on the ICD-10-CM/PCS code updates. Kay Piper reviews and explains ICD-10-CM/PCS coding guidelines in the AHA’s third quarter 2026 ICD-10-CM/PCS Coding Clinic in an easy to access on-demand webcast.

October 12, 2026

2026 ICD-10-CM/PCS Coding Clinic Update: Second Quarter

Uncover critical guidance on the ICD-10-CM/PCS code updates. Kay Piper reviews and explains ICD-10-CM/PCS coding guidelines in the AHA’s second quarter 2026 ICD-10-CM/PCS Coding Clinic in an easy to access on-demand webcast.

July 13, 2026

Trending News

Featured Webcasts

Compliance for the Inpatient Psychiatric Facility (IPF-PPS): Minimizing Federal Audit Findings by Strengthening Best Practices

Federal auditors are intensifying their focus on inpatient psychiatric facilities, using advanced data analytics to spotlight outliers and pursue high‑dollar repayments. In this high‑impact webcast, Michael Calahan, PA, MBA, Compliance Officer and V.P., Hospital & Physician Compliance, breaks down what regulators are really targeting in IPF-PPS admissions, documentation, treatment and discharge planning. Attendees will learn practical steps to tighten processes, avoid common audit triggers and protect reimbursement and reduce the risk of multimillion-dollar repayment demands.

April 9, 2026

Mastering MDM for Accurate Professional Fee Coding

In this timely session, Stacey Shillito, CDIP, CPMA, CCS, CCS-P, CPEDC, COPC, breaks down the complexities of Medical Decision Making (MDM) documentation so providers can confidently capture the true complexity of their care. Attendees will learn practical, efficient strategies to ensure documentation aligns with current E/M guidelines, supports accurate coding, and reduces audit risk, all without adding to charting time.

March 31, 2026

The PEPPER Returns – Risk and Opportunity at Your Fingertips

Join Ronald Hirsch, MD, FACP, CHCQM for The PEPPER Returns – Risk and Opportunity at Your Fingertips, a practical webcast that demystifies the PEPPER and shows you how to turn complex claims data into actionable insights. Dr. Hirsch will explain how to interpret key measures, identify compliance risks, uncover missed revenue opportunities, and understand new updates in the PEPPER, all to help your organization stay ahead of audits and use this powerful data proactively.

March 19, 2026

Top 10 Audit Targets for 2026-2027 for Hospitals & Physicians: Protect Your Revenue

Stay ahead of the 2026-2027 audit surge with “Top 10 Audit Targets for 2026-2027 for Hospitals & Physicians: Protect Your Revenue,” a high-impact webcast led by Michael Calahan, PA, MBA. This concise session gives hospitals and physicians clear insight into the most likely federal audit targets, such as E/M services, split/shared and critical care, observation and admissions, device credits, and Two-Midnight Rule changes, and shows how to tighten documentation, coding, and internal processes to reduce denials, recoupments, and penalties. Attendees walk away with practical best practices to protect revenue, strengthen compliance, and better prepare their teams for inevitable audits.

January 29, 2026

Trending News

Prepare for the 2025 CMS IPPS Final Rule with ICD10monitor’s IPPSPalooza! Click HERE to learn more

Get 15% OFF on all educational webcasts at ICD10monitor with code JULYFOURTH24 until July 4, 2024—start learning today!

CYBER WEEK IS HERE! Don’t miss your chance to get 20% off now until Dec. 1 with code CYBER25

CYBER WEEK IS HERE! Don’t miss your chance to get 20% off now until Dec. 2 with code CYBER24